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elastix::FixedImagePyramidBase< TElastix > Class Template Reference

#include <elxFixedImagePyramidBase.h>

Detailed Description

template<class TElastix>
class elastix::FixedImagePyramidBase< TElastix >

This class is the elastix base class for all FixedImagePyramids.

This class contains all the common functionality for FixedImagePyramids.

Parameters:

FixedImagePyramidSchedule: downsampling factors for the fixed image pyramid.
For each dimension, for each resolution level, the downsampling factor of the fixed image can be specified.
Syntax for 2D images:
(FixedImagePyramidSchedule <reslevel0,dim0> <reslevel0,dim1> <reslevel1,dim0> <reslevel1,dim1> ...)
example: (FixedImagePyramidSchedule 4 4 2 2 1 1)
Default: isotropic, halved in each resolution, so, like in the example. If ImagePyramidSchedule is specified, that schedule is used for both fixed and moving image pyramid.

ImagePyramidSchedule: downsampling factors for fixed and moving image pyramids.
example: (ImagePyramidSchedule 4 4 2 2 1 1)
Used as a default when FixedImagePyramidSchedule is not specified. If both are omitted, a default schedule is assumed: isotropic, halved in each resolution, so, like in the example.

WritePyramidImagesAfterEachResolution: ...
example: (WritePyramidImagesAfterEachResolution "true")
default "false".

Definition at line 58 of file elxFixedImagePyramidBase.h.

Inheritance diagram for elastix::FixedImagePyramidBase< TElastix >:
Inheritance graph
[legend]

Public Types

typedef Superclass::ConfigurationPointer ConfigurationPointer
 
typedef Superclass::ConfigurationType ConfigurationType
 
typedef Superclass::ElastixPointer ElastixPointer
 
typedef Superclass::ElastixType ElastixType
 
typedef ElastixType::FixedImageType InputImageType
 
typedef itk::MultiResolutionPyramidImageFilter< InputImageType, OutputImageTypeITKBaseType
 
typedef ElastixType::FixedImageType OutputImageType
 
typedef Superclass::RegistrationPointer RegistrationPointer
 
typedef Superclass::RegistrationType RegistrationType
 
typedef ITKBaseType::ScheduleType ScheduleType
 
typedef FixedImagePyramidBase Self
 
typedef BaseComponentSE< TElastix > Superclass
 
- Public Types inherited from elastix::BaseComponentSE< TElastix >
typedef ElastixType::ConfigurationPointer ConfigurationPointer
 
typedef ElastixType::ConfigurationType ConfigurationType
 
typedef ElastixType::Pointer ElastixPointer
 
typedef TElastix ElastixType
 
typedef RegistrationTypeRegistrationPointer
 
typedef ElastixType::RegistrationBaseType RegistrationType
 
typedef BaseComponentSE Self
 
typedef BaseComponent Superclass
 

Public Member Functions

virtual void BeforeEachResolutionBase (void)
 
virtual void BeforeRegistrationBase (void)
 
virtual ITKBaseTypeGetAsITKBaseType (void)
 
virtual const ITKBaseTypeGetAsITKBaseType (void) const
 
virtual const char * GetClassName () const
 
virtual void SetFixedSchedule (void)
 
virtual void WritePyramidImage (const std::string &filename, const unsigned int &level)
 
- Public Member Functions inherited from elastix::BaseComponentSE< TElastix >
virtual ConfigurationTypeGetConfiguration (void) const
 
virtual ElastixTypeGetElastix (void) const
 
virtual RegistrationPointer GetRegistration (void) const
 
virtual void SetConfiguration (ConfigurationType *_arg)
 
virtual void SetElastix (ElastixType *_arg)
 
- Public Member Functions inherited from elastix::BaseComponent
virtual void AfterEachIteration (void)
 
virtual void AfterEachIterationBase (void)
 
virtual void AfterEachResolution (void)
 
virtual void AfterEachResolutionBase (void)
 
virtual void AfterRegistration (void)
 
virtual void AfterRegistrationBase (void)
 
virtual int BeforeAll (void)
 
virtual int BeforeAllBase (void)
 
virtual void BeforeEachResolution (void)
 
virtual void BeforeRegistration (void)
 
std::string ConvertSecondsToDHMS (const double totalSeconds, const unsigned int precision) const
 
virtual const char * elxGetClassName (void) const
 
virtual const char * GetComponentLabel (void) const
 
virtual void SetComponentLabel (const char *label, unsigned int idx)
 

Protected Member Functions

 FixedImagePyramidBase ()
 
virtual ~FixedImagePyramidBase ()
 
- Protected Member Functions inherited from elastix::BaseComponentSE< TElastix >
 BaseComponentSE ()
 
virtual ~BaseComponentSE ()
 
- Protected Member Functions inherited from elastix::BaseComponent
 BaseComponent ()
 
virtual ~BaseComponent ()
 

Private Member Functions

 FixedImagePyramidBase (const Self &)
 
void operator= (const Self &)
 

Additional Inherited Members

- Protected Attributes inherited from elastix::BaseComponentSE< TElastix >
ConfigurationPointer m_Configuration
 
ElastixPointer m_Elastix
 
RegistrationPointer m_Registration
 

Member Typedef Documentation

Definition at line 73 of file elxFixedImagePyramidBase.h.

Definition at line 72 of file elxFixedImagePyramidBase.h.

template<class TElastix>
typedef Superclass::ElastixPointer elastix::FixedImagePyramidBase< TElastix >::ElastixPointer

Definition at line 71 of file elxFixedImagePyramidBase.h.

template<class TElastix>
typedef Superclass::ElastixType elastix::FixedImagePyramidBase< TElastix >::ElastixType

Typedefs inherited from the superclass.

Definition at line 67 of file elxFixedImagePyramidBase.h.

template<class TElastix>
typedef ElastixType::FixedImageType elastix::FixedImagePyramidBase< TElastix >::InputImageType

Typedefs inherited from Elastix.

Definition at line 78 of file elxFixedImagePyramidBase.h.

template<class TElastix>
typedef itk::MultiResolutionPyramidImageFilter< InputImageType, OutputImageType > elastix::FixedImagePyramidBase< TElastix >::ITKBaseType

Other typedef's.

Definition at line 83 of file elxFixedImagePyramidBase.h.

template<class TElastix>
typedef ElastixType::FixedImageType elastix::FixedImagePyramidBase< TElastix >::OutputImageType

Definition at line 79 of file elxFixedImagePyramidBase.h.

Definition at line 75 of file elxFixedImagePyramidBase.h.

template<class TElastix>
typedef Superclass::RegistrationType elastix::FixedImagePyramidBase< TElastix >::RegistrationType

Definition at line 74 of file elxFixedImagePyramidBase.h.

template<class TElastix>
typedef ITKBaseType::ScheduleType elastix::FixedImagePyramidBase< TElastix >::ScheduleType

Typedef's from ITKBaseType.

Definition at line 86 of file elxFixedImagePyramidBase.h.

template<class TElastix>
typedef FixedImagePyramidBase elastix::FixedImagePyramidBase< TElastix >::Self

Standard ITK-stuff.

Definition at line 63 of file elxFixedImagePyramidBase.h.

template<class TElastix>
typedef BaseComponentSE< TElastix > elastix::FixedImagePyramidBase< TElastix >::Superclass

Definition at line 64 of file elxFixedImagePyramidBase.h.

Constructor & Destructor Documentation

template<class TElastix>
elastix::FixedImagePyramidBase< TElastix >::FixedImagePyramidBase ( )
inlineprotected

The constructor.

Definition at line 122 of file elxFixedImagePyramidBase.h.

template<class TElastix>
virtual elastix::FixedImagePyramidBase< TElastix >::~FixedImagePyramidBase ( )
inlineprotectedvirtual

The destructor.

Definition at line 124 of file elxFixedImagePyramidBase.h.

template<class TElastix>
elastix::FixedImagePyramidBase< TElastix >::FixedImagePyramidBase ( const Self )
private

The private constructor.

Member Function Documentation

template<class TElastix>
virtual void elastix::FixedImagePyramidBase< TElastix >::BeforeEachResolutionBase ( void  )
virtual

Execute stuff before each resolution:

  • Write the pyramid image to file.

Reimplemented from elastix::BaseComponent.

template<class TElastix>
virtual void elastix::FixedImagePyramidBase< TElastix >::BeforeRegistrationBase ( void  )
virtual

Execute stuff before the actual registration:

  • Set the schedule of the fixed image pyramid.

Reimplemented from elastix::BaseComponent.

template<class TElastix>
virtual ITKBaseType* elastix::FixedImagePyramidBase< TElastix >::GetAsITKBaseType ( void  )
inlinevirtual

Cast to ITKBaseType.

Definition at line 89 of file elxFixedImagePyramidBase.h.

template<class TElastix>
virtual const ITKBaseType* elastix::FixedImagePyramidBase< TElastix >::GetAsITKBaseType ( void  ) const
inlinevirtual

Cast to ITKBaseType, to use in const functions.

Definition at line 96 of file elxFixedImagePyramidBase.h.

template<class TElastix>
virtual const char* elastix::FixedImagePyramidBase< TElastix >::GetClassName ( ) const
virtual
template<class TElastix>
void elastix::FixedImagePyramidBase< TElastix >::operator= ( const Self )
private

The private copy constructor.

template<class TElastix>
virtual void elastix::FixedImagePyramidBase< TElastix >::SetFixedSchedule ( void  )
virtual

Method for setting the schedule.

Reimplemented in elastix::FixedGenericPyramid< TElastix >.

template<class TElastix>
virtual void elastix::FixedImagePyramidBase< TElastix >::WritePyramidImage ( const std::string &  filename,
const unsigned int level 
)
virtual

Method to write the pyramid image.



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