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elastix::ReducedDimensionBSplineResampleInterpolator< TElastix > Class Template Reference

#include <elxReducedDimensionBSplineResampleInterpolator.h>

Detailed Description

template<class TElastix>
class elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >

A resample-interpolator based on B-splines which ignores the last dimension.

The parameters used in this class are:

Parameters:

ResampleInterpolator: Select this resample interpolator as follows:
(ResampleInterpolator "FinalReducedDimensionBSplineInterpolator")

FinalReducedDimensionBSplineInterpolationOrder: the order of the B-spline used to resample the deformed moving image; possible values: (0-5)
example: (FinalReducedDimensionBSplineInterpolationOrder 3)
Default: 3.

The transform parameters necessary for transformix, additionally defined by this class, are:

Transform Parameters:
FinalReducedDimensionBSplineInterpolationOrder: the order of the B-spline used to resample the deformed moving image; possible values: (0-5)
example: (FinalReducedDimensionBSplineInterpolationOrder 3)
Default: 3.

If you are in memory problems, you may use the LinearResampleInterpolator, or the NearestNeighborResampleInterpolator. Note that the former will also interpolate in the last dimension.

See also
ReducedDimensionBSplineResampleInterpolatorFloat

Definition at line 54 of file elxReducedDimensionBSplineResampleInterpolator.h.

Inheritance diagram for elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >:
Inheritance graph
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Public Types

typedef Superclass1::CoefficientDataType CoefficientDataType
 
typedef Superclass1::CoefficientFilter CoefficientFilter
 
typedef Superclass1::CoefficientFilterPointer CoefficientFilterPointer
 
typedef Superclass1::CoefficientImageType CoefficientImageType
 
typedef Superclass2::ConfigurationPointer ConfigurationPointer
 
typedef Superclass2::ConfigurationType ConfigurationType
 
typedef itk::SmartPointer< const SelfConstPointer
 
typedef Superclass1::ContinuousIndexType ContinuousIndexType
 
typedef Superclass1::CovariantVectorType CovariantVectorType
 
typedef Superclass2::ElastixPointer ElastixPointer
 
typedef Superclass2::ElastixType ElastixType
 
typedef Superclass1::IndexType IndexType
 
typedef Superclass1::InputImageType InputImageType
 
typedef Superclass1::Iterator Iterator
 
typedef Superclass2::ITKBaseType ITKBaseType
 
typedef Superclass1::OutputType OutputType
 
typedef itk::SmartPointer< SelfPointer
 
typedef Superclass1::PointType PointType
 
typedef Superclass2::RegistrationPointer RegistrationPointer
 
typedef Superclass2::RegistrationType RegistrationType
 
typedef ReducedDimensionBSplineResampleInterpolator Self
 
typedef itk::BSplineInterpolateImageFunction< typename ResampleInterpolatorBase< TElastix >::InputImageType, typename ResampleInterpolatorBase< TElastix >::CoordRepType, doubleSuperclass1
 
typedef ResampleInterpolatorBase< TElastix > Superclass2
 
- Public Types inherited from itk::ReducedDimensionBSplineInterpolateImageFunction< ResampleInterpolatorBase< TElastix >::InputImageType, ResampleInterpolatorBase< TElastix >::CoordRepType, double >
typedef double CoefficientDataType
 
typedef MultiOrderBSplineDecompositionImageFilter< ResampleInterpolatorBase< TElastix >::InputImageType, CoefficientImageTypeCoefficientFilter
 
typedef CoefficientFilter::Pointer CoefficientFilterPointer
 
typedef Image< CoefficientDataType, itkGetStaticConstMacro(ImageDimension) > CoefficientImageType
 
typedef SmartPointer< const SelfConstPointer
 
typedef Superclass::ContinuousIndexType ContinuousIndexType
 
typedef CovariantVector< OutputType, itkGetStaticConstMacro(ImageDimension) > CovariantVectorType
 
typedef Superclass::IndexType IndexType
 
typedef Superclass::InputImageType InputImageType
 
typedef ImageLinearIteratorWithIndex< ResampleInterpolatorBase< TElastix >::InputImageTypeIterator
 
typedef Superclass::OutputType OutputType
 
typedef SmartPointer< SelfPointer
 
typedef Superclass::PointType PointType
 
typedef ReducedDimensionBSplineInterpolateImageFunction Self
 
typedef InterpolateImageFunction< ResampleInterpolatorBase< TElastix >::InputImageType, ResampleInterpolatorBase< TElastix >::CoordRepType > Superclass
 
- Public Types inherited from elastix::ResampleInterpolatorBase< TElastix >
typedef Superclass::ConfigurationPointer ConfigurationPointer
 
typedef Superclass::ConfigurationType ConfigurationType
 
typedef ElastixType::CoordRepType CoordRepType
 
typedef Superclass::ElastixPointer ElastixPointer
 
typedef Superclass::ElastixType ElastixType
 
typedef ElastixType::MovingImageType InputImageType
 
typedef itk::InterpolateImageFunction< InputImageType, CoordRepTypeITKBaseType
 
typedef ElastixType::ParameterMapType ParameterMapType
 
typedef Superclass::RegistrationPointer RegistrationPointer
 
typedef Superclass::RegistrationType RegistrationType
 
typedef ResampleInterpolatorBase Self
 
typedef BaseComponentSE< TElastix > Superclass
 
- Public Types inherited from elastix::BaseComponentSE< TElastix >
typedef ElastixType::ConfigurationPointer ConfigurationPointer
 
typedef ElastixType::ConfigurationType ConfigurationType
 
typedef ElastixType::Pointer ElastixPointer
 
typedef TElastix ElastixType
 
typedef RegistrationTypeRegistrationPointer
 
typedef ElastixType::RegistrationBaseType RegistrationType
 
typedef BaseComponentSE Self
 
typedef BaseComponent Superclass
 

Public Member Functions

virtual void BeforeRegistration (void)
 
 elxClassNameMacro ("FinalReducedDimensionBSplineInterpolator")
 
virtual const char * GetClassName () const
 
 itkStaticConstMacro (ImageDimension, unsigned int, Superclass1::ImageDimension)
 
virtual void ReadFromFile (void)
 
virtual void WriteToFile (void) const
 
- Public Member Functions inherited from itk::ReducedDimensionBSplineInterpolateImageFunction< ResampleInterpolatorBase< TElastix >::InputImageType, ResampleInterpolatorBase< TElastix >::CoordRepType, double >
virtual OutputType EvaluateAtContinuousIndex (const ContinuousIndexType &index) const
 
CovariantVectorType EvaluateDerivative (const PointType &point) const
 
CovariantVectorType EvaluateDerivativeAtContinuousIndex (const ContinuousIndexType &x) const
 
virtual int GetSplineOrder () const
 
virtual bool GetUseImageDirection () const
 
 itkStaticConstMacro (ImageDimension, unsigned int, Superclass::ImageDimension)
 
virtual void SetInputImage (const ResampleInterpolatorBase< TElastix >::InputImageType *inputData)
 
void SetSplineOrder (unsigned int SplineOrder)
 
virtual void SetUseImageDirection (bool _arg)
 
virtual void UseImageDirectionOff ()
 
virtual void UseImageDirectionOn ()
 
- Public Member Functions inherited from elastix::ResampleInterpolatorBase< TElastix >
virtual int BeforeAllTransformix (void)
 
virtual void CreateTransformParametersMap (ParameterMapType *paramsMap) const
 
virtual ITKBaseTypeGetAsITKBaseType (void)
 
virtual const ITKBaseTypeGetAsITKBaseType (void) const
 
- Public Member Functions inherited from elastix::BaseComponentSE< TElastix >
virtual ConfigurationTypeGetConfiguration (void) const
 
virtual ElastixTypeGetElastix (void) const
 
virtual RegistrationPointer GetRegistration (void) const
 
virtual void SetConfiguration (ConfigurationType *_arg)
 
virtual void SetElastix (ElastixType *_arg)
 
- Public Member Functions inherited from elastix::BaseComponent
virtual void AfterEachIteration (void)
 
virtual void AfterEachIterationBase (void)
 
virtual void AfterEachResolution (void)
 
virtual void AfterEachResolutionBase (void)
 
virtual void AfterRegistration (void)
 
virtual void AfterRegistrationBase (void)
 
virtual int BeforeAll (void)
 
virtual int BeforeAllBase (void)
 
virtual void BeforeEachResolution (void)
 
virtual void BeforeEachResolutionBase (void)
 
virtual void BeforeRegistrationBase (void)
 
std::string ConvertSecondsToDHMS (const double totalSeconds, const unsigned int precision) const
 
virtual const char * elxGetClassName (void) const
 
virtual const char * GetComponentLabel (void) const
 
virtual void SetComponentLabel (const char *label, unsigned int idx)
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from itk::ReducedDimensionBSplineInterpolateImageFunction< ResampleInterpolatorBase< TElastix >::InputImageType, ResampleInterpolatorBase< TElastix >::CoordRepType, double >
static Pointer New ()
 

Protected Member Functions

 ReducedDimensionBSplineResampleInterpolator ()
 
virtual ~ReducedDimensionBSplineResampleInterpolator ()
 
- Protected Member Functions inherited from itk::ReducedDimensionBSplineInterpolateImageFunction< ResampleInterpolatorBase< TElastix >::InputImageType, ResampleInterpolatorBase< TElastix >::CoordRepType, double >
void PrintSelf (std::ostream &os, Indent indent) const
 
 ReducedDimensionBSplineInterpolateImageFunction ()
 
virtual ~ReducedDimensionBSplineInterpolateImageFunction ()
 
- Protected Member Functions inherited from elastix::ResampleInterpolatorBase< TElastix >
 ResampleInterpolatorBase ()
 
virtual ~ResampleInterpolatorBase ()
 
- Protected Member Functions inherited from elastix::BaseComponentSE< TElastix >
 BaseComponentSE ()
 
virtual ~BaseComponentSE ()
 
- Protected Member Functions inherited from elastix::BaseComponent
 BaseComponent ()
 
virtual ~BaseComponent ()
 

Private Member Functions

void operator= (const Self &)
 
 ReducedDimensionBSplineResampleInterpolator (const Self &)
 

Additional Inherited Members

- Protected Attributes inherited from itk::ReducedDimensionBSplineInterpolateImageFunction< ResampleInterpolatorBase< TElastix >::InputImageType, ResampleInterpolatorBase< TElastix >::CoordRepType, double >
CoefficientImageType::ConstPointer m_Coefficients
 
ResampleInterpolatorBase< TElastix >::InputImageType::SizeType m_DataLength
 
std::vector< CoefficientDataTypem_Scratch
 
unsigned int m_SplineOrder
 
- Protected Attributes inherited from elastix::BaseComponentSE< TElastix >
ConfigurationPointer m_Configuration
 
ElastixPointer m_Elastix
 
RegistrationPointer m_Registration
 

Member Typedef Documentation

template<class TElastix >
typedef Superclass1::CoefficientDataType elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::CoefficientDataType
template<class TElastix >
typedef Superclass1::CoefficientFilter elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::CoefficientFilter
template<class TElastix >
typedef Superclass1::CoefficientFilterPointer elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::CoefficientFilterPointer
template<class TElastix >
typedef Superclass1::CoefficientImageType elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::CoefficientImageType
template<class TElastix >
typedef itk::SmartPointer< const Self > elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::ConstPointer
template<class TElastix >
typedef Superclass1::ContinuousIndexType elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::ContinuousIndexType
template<class TElastix >
typedef Superclass1::CovariantVectorType elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::CovariantVectorType
template<class TElastix >
typedef Superclass1::IndexType elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::IndexType
template<class TElastix >
typedef Superclass1::InputImageType elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::InputImageType
template<class TElastix >
typedef Superclass1::Iterator elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::Iterator
template<class TElastix >
typedef Superclass1::OutputType elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::OutputType

Typedef's inherited from the superclass.

Definition at line 90 of file elxReducedDimensionBSplineResampleInterpolator.h.

template<class TElastix >
typedef itk::SmartPointer< Self > elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::Pointer
template<class TElastix >
typedef Superclass1::PointType elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::PointType

Standard ITK-stuff.

Definition at line 65 of file elxReducedDimensionBSplineResampleInterpolator.h.

template<class TElastix >
typedef itk::BSplineInterpolateImageFunction< typename ResampleInterpolatorBase< TElastix >::InputImageType, typename ResampleInterpolatorBase< TElastix >::CoordRepType, double > elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::Superclass1
template<class TElastix >
typedef ResampleInterpolatorBase< TElastix > elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::Superclass2

Constructor & Destructor Documentation

The constructor.

Definition at line 125 of file elxReducedDimensionBSplineResampleInterpolator.h.

template<class TElastix >
virtual elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::~ReducedDimensionBSplineResampleInterpolator ( )
inlineprotectedvirtual

The destructor.

Definition at line 127 of file elxReducedDimensionBSplineResampleInterpolator.h.

The private constructor.

Member Function Documentation

template<class TElastix >
virtual void elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::BeforeRegistration ( void  )
virtual

Execute stuff before the actual registration:

  • Set the spline order.

Reimplemented from elastix::BaseComponent.

template<class TElastix >
elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::elxClassNameMacro ( "FinalReducedDimensionBSplineInterpolator"  )

Name of this class. Use this name in the parameter file to select this specific resample interpolator.
example: (ResampleInterpolator "FinalBSplineInterpolator")

template<class TElastix >
virtual const char* elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::GetClassName ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from elastix::ResampleInterpolatorBase< TElastix >.

template<class TElastix >
elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::itkStaticConstMacro ( ImageDimension  ,
unsigned  int,
Superclass1::ImageDimension   
)

Dimension of the image.

template<class TElastix >
static Pointer elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::New ( )
static

Method for creation through the object factory.

template<class TElastix >
void elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::operator= ( const Self )
private

The private copy constructor.

template<class TElastix >
virtual void elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::ReadFromFile ( void  )
virtual

Function to read transform-parameters from a file.

Reimplemented from elastix::ResampleInterpolatorBase< TElastix >.

template<class TElastix >
virtual void elastix::ReducedDimensionBSplineResampleInterpolator< TElastix >::WriteToFile ( void  ) const
virtual

Function to write transform-parameters to a file.

Reimplemented from elastix::ResampleInterpolatorBase< TElastix >.



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