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itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType > Class Template Reference

#include <itkTransformRigidityPenaltyTerm.h>

Detailed Description

template<class TFixedImage, class TScalarType>
class itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >

A cost function that calculates a rigidity penalty term.

A cost function that calculates a rigidity penalty term based on the B-spline coefficients of a B-spline transformation. This penalty term is a function of the 1st and 2nd order spatial derivatives of a transformation.

The intended use for this metric is to filter a B-spline coefficient image in order to calculate a rigidity penalty term on a B-spline transform.

The RigidityPenaltyTermValueImageFilter at each pixel location is computed by convolution with some separable 1D kernels.

The rigid penalty term penalizes deviations from a rigid transformation at regions specified by the so-called rigidity images.

This metric only works with B-splines as a transformation model.

References:
[1] M. Staring, S. Klein and J.P.W. Pluim, "A Rigidity Penalty Term for Nonrigid Registration," Medical Physics, vol. 34, no. 11, pp. 4098 - 4108, November 2007.

See also
BSplineTransform

Definition at line 71 of file itkTransformRigidityPenaltyTerm.h.

Inheritance diagram for itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >:
Inheritance graph
[legend]

Public Types

typedef BSplineTransformType::Pointer BSplineTransformPointer
 
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 3 > BSplineTransformType
 
typedef ImageRegionIterator< CoefficientImageTypeCoefficientImageIteratorType
 
typedef CoefficientImageType::Pointer CoefficientImagePointer
 
typedef CoefficientImageType::SpacingType CoefficientImageSpacingType
 
typedef BSplineTransformType::ImageType CoefficientImageType
 
typedef AdvancedCombinationTransform< ScalarType, FixedImageDimension > CombinationTransformType
 
typedef SmartPointer< const SelfConstPointer
 
typedef Superclass::CoordinateRepresentationType CoordinateRepresentationType
 
typedef Superclass::DerivativeType DerivativeType
 
typedef Superclass::DerivativeValueType DerivativeValueType
 
typedef DilateFilterType::Pointer DilateFilterPointer
 
typedef GrayscaleDilateImageFilter< RigidityImageType, RigidityImageType, StructuringElementTypeDilateFilterType
 
typedef Superclass::FixedImageConstPointer FixedImageConstPointer
 
typedef Superclass::FixedImageMaskPointer FixedImageMaskPointer
 
typedef Superclass::FixedImageMaskType FixedImageMaskType
 
typedef Superclass::FixedImagePixelType FixedImagePixelType
 
typedef Superclass::FixedImagePointer FixedImagePointer
 
typedef Superclass::FixedImageRegionType FixedImageRegionType
 
typedef Superclass::FixedImageType FixedImageType
 
typedef Superclass::GradientImageFilterPointer GradientImageFilterPointer
 
typedef Superclass::GradientImageFilterType GradientImageFilterType
 
typedef Superclass::GradientImagePointer GradientImagePointer
 
typedef Superclass::GradientImageType GradientImageType
 
typedef Superclass::GradientPixelType GradientPixelType
 
typedef BSplineTransformType::SpacingType GridSpacingType
 
typedef Superclass::ImageSampleContainerPointer ImageSampleContainerPointer
 
typedef Superclass::ImageSampleContainerType ImageSampleContainerType
 
typedef Superclass::InputPointType InputPointType
 
typedef Superclass::InternalMatrixType InternalMatrixType
 
typedef Superclass::InterpolatorPointer InterpolatorPointer
 
typedef Superclass::InterpolatorType InterpolatorType
 
typedef Superclass::JacobianOfSpatialHessianType JacobianOfSpatialHessianType
 
typedef Superclass::JacobianOfSpatialJacobianType JacobianOfSpatialJacobianType
 
typedef Superclass::MeasureType MeasureType
 
typedef Superclass::MovingImageConstPointer MovingImageConstPointer
 
typedef Superclass::MovingImageMaskPointer MovingImageMaskPointer
 
typedef Superclass::MovingImageMaskType MovingImageMaskType
 
typedef Superclass::MovingImagePixelType MovingImagePixelType
 
typedef Superclass::MovingImagePointer MovingImagePointer
 
typedef Superclass::MovingImageType MovingImageType
 
typedef NeighborhoodIterator< CoefficientImageTypeNeighborhoodIteratorType
 
typedef NeighborhoodType::SizeType NeighborhoodSizeType
 
typedef Neighborhood< ScalarType, itkGetStaticConstMacro(FixedImageDimension) > NeighborhoodType
 
typedef NeighborhoodOperatorImageFilter< CoefficientImageType, CoefficientImageTypeNOIFType
 
typedef Superclass::OutputPointType OutputPointType
 
typedef Superclass::ParametersType ParametersType
 
typedef SmartPointer< SelfPointer
 
typedef NeighborhoodIteratorType::RadiusType RadiusType
 
typedef Superclass::RealType RealType
 
typedef RigidityImageType::IndexType RigidityImageIndexType
 
typedef ImageRegionIterator< RigidityImageTypeRigidityImageIteratorType
 
typedef RigidityImageType::Pointer RigidityImagePointer
 
typedef RigidityImageType::PointType RigidityImagePointType
 
typedef RigidityImageType::RegionType RigidityImageRegionType
 
typedef CoefficientImageType RigidityImageType
 
typedef RigidityImageType::PixelType RigidityPixelType
 
typedef Superclass::ScalarType ScalarType
 
typedef TransformRigidityPenaltyTerm Self
 
typedef StructuringElementType::RadiusType SERadiusType
 
typedef Superclass::SpatialHessianType SpatialHessianType
 
typedef Superclass::SpatialJacobianType SpatialJacobianType
 
typedef BinaryBallStructuringElement< RigidityPixelType, itkGetStaticConstMacro(FixedImageDimension) > StructuringElementType
 
typedef TransformPenaltyTerm< TFixedImage, TScalarType > Superclass
 
typedef Superclass::TransformJacobianType TransformJacobianType
 
typedef Superclass::TransformParametersType TransformParametersType
 
typedef Superclass::TransformPointer TransformPointer
 
typedef Superclass::TransformType TransformType
 
- Public Types inherited from itk::TransformPenaltyTerm< TFixedImage, TScalarType >
typedef SmartPointer< const SelfConstPointer
 
typedef Superclass::CoordinateRepresentationType CoordinateRepresentationType
 
typedef Superclass::DerivativeType DerivativeType
 
typedef Superclass::DerivativeValueType DerivativeValueType
 
typedef Superclass::FixedImageConstPointer FixedImageConstPointer
 
typedef Superclass::FixedImageMaskPointer FixedImageMaskPointer
 
typedef Superclass::FixedImageMaskType FixedImageMaskType
 
typedef Superclass::FixedImagePixelType FixedImagePixelType
 
typedef Superclass::FixedImagePointer FixedImagePointer
 
typedef Superclass::FixedImageRegionType FixedImageRegionType
 
typedef Superclass::FixedImageType FixedImageType
 
typedef Superclass::GradientImageFilterPointer GradientImageFilterPointer
 
typedef Superclass::GradientImageFilterType GradientImageFilterType
 
typedef Superclass::GradientImagePointer GradientImagePointer
 
typedef Superclass::GradientImageType GradientImageType
 
typedef Superclass::GradientPixelType GradientPixelType
 
typedef Superclass::ImageSampleContainerPointer ImageSampleContainerPointer
 
typedef Superclass::ImageSampleContainerType ImageSampleContainerType
 
typedef Superclass::InputPointType InputPointType
 
typedef TransformType::InternalMatrixType InternalMatrixType
 
typedef Superclass::InterpolatorPointer InterpolatorPointer
 
typedef Superclass::InterpolatorType InterpolatorType
 
typedef TransformType::JacobianOfSpatialHessianType JacobianOfSpatialHessianType
 
typedef TransformType::JacobianOfSpatialJacobianType JacobianOfSpatialJacobianType
 
typedef Superclass::MeasureType MeasureType
 
typedef Superclass::MovingImageConstPointer MovingImageConstPointer
 
typedef Superclass::MovingImageMaskPointer MovingImageMaskPointer
 
typedef Superclass::MovingImageMaskType MovingImageMaskType
 
typedef Superclass::MovingImagePixelType MovingImagePixelType
 
typedef Superclass::MovingImagePointer MovingImagePointer
 
typedef Superclass::MovingImageType MovingImageType
 
typedef Superclass::OutputPointType OutputPointType
 
typedef Superclass::ParametersType ParametersType
 
typedef SmartPointer< SelfPointer
 
typedef Superclass::RealType RealType
 
typedef TScalarType ScalarType
 
typedef TransformPenaltyTerm Self
 
typedef TransformType::SpatialHessianType SpatialHessianType
 
typedef TransformType::SpatialJacobianType SpatialJacobianType
 
typedef AdvancedImageToImageMetric< TFixedImage, TFixedImage > Superclass
 
typedef Superclass::ThreaderType ThreaderType
 
typedef Superclass::ThreadInfoType ThreadInfoType
 
typedef Superclass::TransformJacobianType TransformJacobianType
 
typedef Superclass::TransformParametersType TransformParametersType
 
typedef Superclass::AdvancedTransformType TransformType
 
- Public Types inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
typedef AdvancedTransform< ScalarType, FixedImageDimension, MovingImageDimension > AdvancedTransformType
 
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 1 > BSplineOrder1TransformType
 
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 2 > BSplineOrder2TransformType
 
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 3 > BSplineOrder3TransformType
 
typedef AdvancedCombinationTransform< ScalarType, FixedImageDimension > CombinationTransformType
 
typedef SmartPointer< const SelfConstPointer
 
typedef Superclass::CoordinateRepresentationType CoordinateRepresentationType
 
typedef Superclass::DerivativeType DerivativeType
 
typedef DerivativeType::ValueType DerivativeValueType
 
typedef Superclass::FixedImageConstPointer FixedImageConstPointer
 
typedef FixedImageLimiterType::OutputType FixedImageLimiterOutputType
 
typedef FixedImageLimiterType::Pointer FixedImageLimiterPointer
 
typedef LimiterFunctionBase< RealType, FixedImageDimension > FixedImageLimiterType
 
typedef Superclass::FixedImageMaskPointer FixedImageMaskPointer
 
typedef Superclass::FixedImageMaskType FixedImageMaskType
 
typedef FixedImageType::PixelType FixedImagePixelType
 
typedef FixedImageType::Pointer FixedImagePointer
 
typedef Superclass::FixedImageRegionType FixedImageRegionType
 
typedef Superclass::FixedImageType FixedImageType
 
typedef Superclass::GradientImageFilterPointer GradientImageFilterPointer
 
typedef Superclass::GradientImageFilterType GradientImageFilterType
 
typedef Superclass::GradientImagePointer GradientImagePointer
 
typedef Superclass::GradientImageType GradientImageType
 
typedef Superclass::GradientPixelType GradientPixelType
 
typedef vnl_sparse_matrix< HessianValueTypeHessianType
 
typedef DerivativeType::ValueType HessianValueType
 
typedef ImageSamplerType::OutputVectorContainerPointer ImageSampleContainerPointer
 
typedef ImageSamplerType::OutputVectorContainerType ImageSampleContainerType
 
typedef ImageSamplerType::Pointer ImageSamplerPointer
 
typedef ImageSamplerBase< FixedImageTypeImageSamplerType
 
typedef Superclass::InputPointType InputPointType
 
typedef Superclass::InterpolatorPointer InterpolatorPointer
 
typedef Superclass::InterpolatorType InterpolatorType
 
typedef Superclass::MeasureType MeasureType
 
typedef Superclass::MovingImageConstPointer MovingImageConstPointer
 
typedef FixedArray< double, Self::MovingImageDimension > MovingImageDerivativeScalesType
 
typedef MovingImageLimiterType::OutputType MovingImageLimiterOutputType
 
typedef MovingImageLimiterType::Pointer MovingImageLimiterPointer
 
typedef LimiterFunctionBase< RealType, MovingImageDimension > MovingImageLimiterType
 
typedef Superclass::MovingImageMaskPointer MovingImageMaskPointer
 
typedef Superclass::MovingImageMaskType MovingImageMaskType
 
typedef Superclass::MovingImagePixelType MovingImagePixelType
 
typedef MovingImageType::Pointer MovingImagePointer
 
typedef MovingImageType::RegionType MovingImageRegionType
 
typedef Superclass::MovingImageType MovingImageType
 
typedef AdvancedTransformType::NumberOfParametersType NumberOfParametersType
 
typedef Superclass::OutputPointType OutputPointType
 
typedef Superclass::ParametersType ParametersType
 
typedef SmartPointer< SelfPointer
 
typedef Superclass::RealType RealType
 
typedef TransformType::ScalarType ScalarType
 
typedef AdvancedImageToImageMetric Self
 
typedef ImageToImageMetric< TFixedImage, TFixedImage > Superclass
 
typedef itk::MultiThreader ThreaderType
 
typedef ThreaderType::ThreadInfoStruct ThreadInfoType
 
typedef Superclass::TransformJacobianType TransformJacobianType
 
typedef Superclass::TransformParametersType TransformParametersType
 
typedef Superclass::TransformPointer TransformPointer
 
typedef Superclass::TransformType TransformType
 

Public Member Functions

virtual void BeforeThreadedGetValueAndDerivative (const TransformParametersType &parameters) const
 
void CheckUseAndCalculationBooleans (void)
 
void FillRigidityCoefficientImage (const ParametersType &parameters) const
 
virtual const char * GetClassName () const
 
virtual void GetDerivative (const ParametersType &parameters, DerivativeType &derivative) const
 
virtual const MeasureTypeGetLinearityConditionGradientMagnitude ()
 
virtual const MeasureTypeGetLinearityConditionValue ()
 
virtual ScalarType GetLinearityConditionWeight ()
 
virtual const MeasureTypeGetOrthonormalityConditionGradientMagnitude ()
 
virtual const MeasureTypeGetOrthonormalityConditionValue ()
 
virtual ScalarType GetOrthonormalityConditionWeight ()
 
virtual const MeasureTypeGetPropernessConditionGradientMagnitude ()
 
virtual const MeasureTypeGetPropernessConditionValue ()
 
virtual ScalarType GetPropernessConditionWeight ()
 
virtual MeasureType GetValue (const ParametersType &parameters) const
 
virtual void GetValueAndDerivative (const ParametersType &parameters, MeasureType &value, DerivativeType &derivative) const
 
virtual void Initialize (void) throw ( ExceptionObject )
 
 itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
 
 itkStaticConstMacro (MovingImageDimension, unsigned int, FixedImageType::ImageDimension)
 
 itkStaticConstMacro (ImageDimension, unsigned int, FixedImageType::ImageDimension)
 
virtual void SetBSplineTransform (BSplineTransformType *_arg)
 
virtual void SetCalculateLinearityCondition (bool _arg)
 
virtual void SetCalculateOrthonormalityCondition (bool _arg)
 
virtual void SetCalculatePropernessCondition (bool _arg)
 
virtual void SetDilateRigidityImages (bool _arg)
 
virtual void SetDilationRadiusMultiplier (CoordinateRepresentationType _arg)
 
virtual void SetFixedRigidityImage (RigidityImageType *_arg)
 
virtual void SetLinearityConditionWeight (ScalarType _arg)
 
virtual void SetMovingRigidityImage (RigidityImageType *_arg)
 
virtual void SetOrthonormalityConditionWeight (ScalarType _arg)
 
virtual void SetPropernessConditionWeight (ScalarType _arg)
 
virtual void SetUseFixedRigidityImage (bool _arg)
 
virtual void SetUseLinearityCondition (bool _arg)
 
virtual void SetUseMovingRigidityImage (bool _arg)
 
virtual void SetUseOrthonormalityCondition (bool _arg)
 
virtual void SetUsePropernessCondition (bool _arg)
 
- Public Member Functions inherited from itk::TransformPenaltyTerm< TFixedImage, TScalarType >
 itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
 
- Public Member Functions inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
virtual const FixedImageLimiterTypeGetFixedImageLimiter ()
 
virtual double GetFixedLimitRangeRatio () const
 
virtual ImageSamplerTypeGetImageSampler (void) const
 
virtual const MovingImageDerivativeScalesTypeGetMovingImageDerivativeScales ()
 
virtual const MovingImageLimiterTypeGetMovingImageLimiter ()
 
virtual double GetMovingLimitRangeRatio () const
 
virtual double GetRequiredRatioOfValidSamples () const
 
virtual bool GetScaleGradientWithRespectToMovingImageOrientation () const
 
virtual void GetSelfHessian (const TransformParametersType &parameters, HessianType &H) const
 
const AdvancedTransformTypeGetTransform (void) const
 
virtual bool GetUseFixedImageLimiter () const
 
virtual bool GetUseImageSampler () const
 
virtual const boolGetUseMetricSingleThreaded ()
 
virtual bool GetUseMovingImageDerivativeScales () const
 
virtual bool GetUseMovingImageLimiter () const
 
virtual const boolGetUseMultiThread ()
 
 itkStaticConstMacro (MovingImageDimension, unsigned int, TFixedImage::ImageDimension)
 
 itkStaticConstMacro (FixedImageDimension, unsigned int, TFixedImage::ImageDimension)
 
virtual void SetFixedImageLimiter (FixedImageLimiterType *_arg)
 
virtual void SetFixedLimitRangeRatio (double _arg)
 
virtual void SetImageSampler (ImageSamplerType *_arg)
 
virtual void SetMovingImageDerivativeScales (MovingImageDerivativeScalesType _arg)
 
virtual void SetMovingImageLimiter (MovingImageLimiterType *_arg)
 
virtual void SetMovingLimitRangeRatio (double _arg)
 
virtual void SetNumberOfThreads (ThreadIdType numberOfThreads)
 
virtual void SetRequiredRatioOfValidSamples (double _arg)
 
virtual void SetScaleGradientWithRespectToMovingImageOrientation (bool _arg)
 
virtual void SetTransform (AdvancedTransformType *arg)
 
virtual void SetUseMetricSingleThreaded (bool _arg)
 
virtual void SetUseMovingImageDerivativeScales (bool _arg)
 
virtual void SetUseMultiThread (bool _arg)
 
virtual void UseMetricSingleThreadedOff ()
 
virtual void UseMetricSingleThreadedOn ()
 
virtual void UseMultiThreadOff ()
 
virtual void UseMultiThreadOn ()
 

Static Public Member Functions

static Pointer New ()
 

Protected Member Functions

void PrintSelf (std::ostream &os, Indent indent) const
 
 TransformRigidityPenaltyTerm ()
 
virtual ~TransformRigidityPenaltyTerm ()
 
- Protected Member Functions inherited from itk::TransformPenaltyTerm< TFixedImage, TScalarType >
virtual bool CheckForBSplineTransform (BSplineTransformPointer &bspline) const
 
 TransformPenaltyTerm ()
 
virtual ~TransformPenaltyTerm ()
 
- Protected Member Functions inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
 AdvancedImageToImageMetric ()
 
virtual void AfterThreadedGetValueAndDerivative (MeasureType &value, DerivativeType &derivative) const
 
virtual void CheckForAdvancedTransform (void)
 
virtual void CheckForBSplineInterpolator (void)
 
virtual void CheckForBSplineTransform (void)
 
virtual void CheckNumberOfSamples (unsigned long wanted, unsigned long found) const
 
virtual void ComputeFixedImageExtrema (const FixedImageType *image, const FixedImageRegionType &region)
 
virtual void ComputeMovingImageExtrema (const MovingImageType *image, const MovingImageRegionType &region)
 
virtual bool EvaluateMovingImageValueAndDerivative (const MovingImagePointType &mappedPoint, RealType &movingImageValue, MovingImageDerivativeType *gradient) const
 
virtual bool EvaluateTransformJacobian (const FixedImagePointType &fixedImagePoint, TransformJacobianType &jacobian, NonZeroJacobianIndicesType &nzji) const
 
virtual void EvaluateTransformJacobianInnerProduct (const TransformJacobianType &jacobian, const MovingImageDerivativeType &movingImageDerivative, DerivativeType &imageJacobian) const
 
virtual void InitializeImageSampler (void) throw ( ExceptionObject )
 
virtual void InitializeLimiters (void)
 
virtual void InitializeThreadingParameters (void) const
 
virtual bool IsInsideMovingMask (const MovingImagePointType &point) const
 
 itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValueAndDerivativePerThreadStruct, AlignedGetValueAndDerivativePerThreadStruct)
 
 itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValueAndDerivativePerThreadStruct, PaddedGetValueAndDerivativePerThreadStruct)
 
void LaunchGetValueAndDerivativeThreaderCallback (void) const
 
void PrintSelf (std::ostream &os, Indent indent) const
 
virtual void SetUseFixedImageLimiter (bool _arg)
 
virtual void SetUseImageSampler (bool _arg)
 
virtual void SetUseMovingImageLimiter (bool _arg)
 
virtual void ThreadedGetValueAndDerivative (ThreadIdType threadID)
 
virtual bool TransformPoint (const FixedImagePointType &fixedImagePoint, MovingImagePointType &mappedPoint) const
 
virtual ~AdvancedImageToImageMetric ()
 

Private Member Functions

void Create1DOperator (NeighborhoodType &F, const std::string &whichF, const unsigned int WhichDimension, const CoefficientImageSpacingType &spacing) const
 
void CreateNDOperator (NeighborhoodType &F, const std::string &whichF, const CoefficientImageSpacingType &spacing) const
 
virtual void DilateRigidityImages (void)
 
CoefficientImagePointer FilterSeparable (const CoefficientImageType *, const std::vector< NeighborhoodType > &Operators) const
 
void operator= (const Self &)
 
 TransformRigidityPenaltyTerm (const Self &)
 

Private Attributes

BSplineTransformPointer m_BSplineTransform
 
bool m_CalculateLinearityCondition
 
bool m_CalculateOrthonormalityCondition
 
bool m_CalculatePropernessCondition
 
bool m_DilateRigidityImages
 
CoordinateRepresentationType m_DilationRadiusMultiplier
 
RigidityImagePointer m_FixedRigidityImage
 
RigidityImagePointer m_FixedRigidityImageDilated
 
std::vector< DilateFilterPointerm_FixedRigidityImageDilation
 
MeasureType m_LinearityConditionGradientMagnitude
 
MeasureType m_LinearityConditionValue
 
ScalarType m_LinearityConditionWeight
 
RigidityImagePointer m_MovingRigidityImage
 
RigidityImagePointer m_MovingRigidityImageDilated
 
std::vector< DilateFilterPointerm_MovingRigidityImageDilation
 
MeasureType m_OrthonormalityConditionGradientMagnitude
 
MeasureType m_OrthonormalityConditionValue
 
ScalarType m_OrthonormalityConditionWeight
 
MeasureType m_PropernessConditionGradientMagnitude
 
MeasureType m_PropernessConditionValue
 
ScalarType m_PropernessConditionWeight
 
RigidityImagePointer m_RigidityCoefficientImage
 
bool m_RigidityCoefficientImageIsFilled
 
MeasureType m_RigidityPenaltyTermValue
 
bool m_UseFixedRigidityImage
 
bool m_UseLinearityCondition
 
bool m_UseMovingRigidityImage
 
bool m_UseOrthonormalityCondition
 
bool m_UsePropernessCondition
 

Additional Inherited Members

- Protected Types inherited from itk::TransformPenaltyTerm< TFixedImage, TScalarType >
typedef BSplineTransformType::Pointer BSplineTransformPointer
 
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 3 > BSplineTransformType
 
typedef AdvancedCombinationTransform< ScalarType, FixedImageDimension > CombinationTransformType
 
typedef Superclass::FixedImageIndexType FixedImageIndexType
 
typedef Superclass::FixedImageIndexValueType FixedImageIndexValueType
 
typedef Superclass::FixedImagePointType FixedImagePointType
 
typedef Superclass::MovingImageContinuousIndexType MovingImageContinuousIndexType
 
typedef Superclass::MovingImageIndexType MovingImageIndexType
 
typedef Superclass::MovingImagePointType MovingImagePointType
 
typedef Superclass::NonZeroJacobianIndicesType NonZeroJacobianIndicesType
 
- Protected Types inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
typedef BSplineInterpolatorFloatType::Pointer BSplineInterpolatorFloatPointer
 
typedef BSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, floatBSplineInterpolatorFloatType
 
typedef BSplineInterpolatorType::Pointer BSplineInterpolatorPointer
 
typedef BSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, doubleBSplineInterpolatorType
 
typedef CentralDifferenceGradientFilterType::Pointer CentralDifferenceGradientFilterPointer
 
typedef GradientImageFilter< MovingImageType, RealType, RealTypeCentralDifferenceGradientFilterType
 
typedef FixedImageType::IndexType FixedImageIndexType
 
typedef FixedImageIndexType::IndexValueType FixedImageIndexValueType
 
typedef TransformType::InputPointType FixedImagePointType
 
typedef LinearInterpolatorType::Pointer LinearInterpolatorPointer
 
typedef AdvancedLinearInterpolateImageFunction< MovingImageType, CoordinateRepresentationTypeLinearInterpolatorType
 
typedef InterpolatorType::ContinuousIndexType MovingImageContinuousIndexType
 
typedef BSplineInterpolatorType::CovariantVectorType MovingImageDerivativeType
 
typedef MovingImageType::IndexType MovingImageIndexType
 
typedef TransformType::OutputPointType MovingImagePointType
 
typedef AdvancedTransformType::NonZeroJacobianIndicesType NonZeroJacobianIndicesType
 
typedef ReducedBSplineInterpolatorType::Pointer ReducedBSplineInterpolatorPointer
 
typedef ReducedDimensionBSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, doubleReducedBSplineInterpolatorType
 
- Static Protected Member Functions inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
static ITK_THREAD_RETURN_TYPE AccumulateDerivativesThreaderCallback (void *arg)
 
static ITK_THREAD_RETURN_TYPE GetValueAndDerivativeThreaderCallback (void *arg)
 
- Protected Attributes inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
AdvancedTransformType::Pointer m_AdvancedTransform
 
BSplineInterpolatorPointer m_BSplineInterpolator
 
BSplineInterpolatorFloatPointer m_BSplineInterpolatorFloat
 
CentralDifferenceGradientFilterPointer m_CentralDifferenceGradientFilter
 
FixedImageLimiterPointer m_FixedImageLimiter
 
FixedImageLimiterOutputType m_FixedImageMaxLimit
 
FixedImageLimiterOutputType m_FixedImageMinLimit
 
FixedImagePixelType m_FixedImageTrueMax
 
FixedImagePixelType m_FixedImageTrueMin
 
AlignedGetValueAndDerivativePerThreadStruct * m_GetValueAndDerivativePerThreadVariables
 
ThreadIdType m_GetValueAndDerivativePerThreadVariablesSize
 
ImageSamplerPointer m_ImageSampler
 
bool m_InterpolatorIsBSpline
 
bool m_InterpolatorIsBSplineFloat
 
bool m_InterpolatorIsLinear
 
bool m_InterpolatorIsReducedBSpline
 
LinearInterpolatorPointer m_LinearInterpolator
 
MovingImageLimiterPointer m_MovingImageLimiter
 
MovingImageLimiterOutputType m_MovingImageMaxLimit
 
MovingImageLimiterOutputType m_MovingImageMinLimit
 
MovingImagePixelType m_MovingImageTrueMax
 
MovingImagePixelType m_MovingImageTrueMin
 
ReducedBSplineInterpolatorPointer m_ReducedBSplineInterpolator
 
MultiThreaderParameterType m_ThreaderMetricParameters
 
bool m_TransformIsAdvanced
 
bool m_TransformIsBSpline
 
bool m_UseMetricSingleThreaded
 
bool m_UseMultiThread
 
bool m_UseOpenMP
 

Member Typedef Documentation

template<class TFixedImage, class TScalarType>
typedef BSplineTransformType::Pointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::BSplineTransformPointer

Definition at line 146 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 3 > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::BSplineTransformType

Typedef's for B-spline transform.

Definition at line 145 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef ImageRegionIterator< CoefficientImageType > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::CoefficientImageIteratorType

Definition at line 158 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef CoefficientImageType::Pointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::CoefficientImagePointer

Definition at line 149 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef CoefficientImageType::SpacingType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::CoefficientImageSpacingType

Definition at line 150 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef BSplineTransformType::ImageType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::CoefficientImageType

Definition at line 148 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef AdvancedCombinationTransform< ScalarType, FixedImageDimension > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::CombinationTransformType

Definition at line 152 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef SmartPointer< const Self > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::ConstPointer

Definition at line 81 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::CoordinateRepresentationType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::CoordinateRepresentationType

Typedefs inherited from the superclass.

Definition at line 87 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::DerivativeType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::DerivativeType

Definition at line 118 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::DerivativeValueType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::DerivativeValueType

Definition at line 119 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef DilateFilterType::Pointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::DilateFilterPointer

Definition at line 179 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef GrayscaleDilateImageFilter< RigidityImageType, RigidityImageType, StructuringElementType > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::DilateFilterType

Definition at line 178 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::FixedImageConstPointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::FixedImageConstPointer

Definition at line 97 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::FixedImageMaskPointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::FixedImageMaskPointer

Definition at line 114 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::FixedImageMaskType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::FixedImageMaskType

Definition at line 113 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::FixedImagePixelType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::FixedImagePixelType

Definition at line 121 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::FixedImagePointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::FixedImagePointer

Definition at line 96 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::FixedImageRegionType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::FixedImageRegionType

Definition at line 98 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::FixedImageType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::FixedImageType

Definition at line 95 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::GradientImageFilterPointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GradientImageFilterPointer

Definition at line 112 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::GradientImageFilterType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GradientImageFilterType

Definition at line 111 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::GradientImagePointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GradientImagePointer

Definition at line 110 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::GradientImageType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GradientImageType

Definition at line 109 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::GradientPixelType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GradientPixelType

Definition at line 108 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef BSplineTransformType::SpacingType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GridSpacingType

Definition at line 147 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::ImageSampleContainerPointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::ImageSampleContainerPointer

Definition at line 123 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::ImageSampleContainerType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::ImageSampleContainerType

Definition at line 122 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::InputPointType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::InputPointType

Definition at line 101 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::InternalMatrixType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::InternalMatrixType

Definition at line 133 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::InterpolatorPointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::InterpolatorPointer

Definition at line 106 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::InterpolatorType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::InterpolatorType

Definition at line 105 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass ::JacobianOfSpatialHessianType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::JacobianOfSpatialHessianType

Definition at line 132 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass ::JacobianOfSpatialJacobianType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::JacobianOfSpatialJacobianType

Definition at line 129 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::MeasureType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::MeasureType

Definition at line 117 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::MovingImageConstPointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::MovingImageConstPointer

Definition at line 94 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::MovingImageMaskPointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::MovingImageMaskPointer

Definition at line 116 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::MovingImageMaskType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::MovingImageMaskType

Definition at line 115 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::MovingImagePixelType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::MovingImagePixelType

Definition at line 92 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::MovingImagePointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::MovingImagePointer

Definition at line 93 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::MovingImageType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::MovingImageType

Definition at line 91 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef NeighborhoodIterator< CoefficientImageType > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::NeighborhoodIteratorType

Definition at line 161 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef NeighborhoodType::SizeType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::NeighborhoodSizeType

Definition at line 157 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Neighborhood< ScalarType, itkGetStaticConstMacro( FixedImageDimension ) > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::NeighborhoodType

Typedef support for neighborhoods, filters, etc.

Definition at line 156 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef NeighborhoodOperatorImageFilter< CoefficientImageType, CoefficientImageType > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::NOIFType

Definition at line 160 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::OutputPointType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::OutputPointType

Definition at line 102 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::ParametersType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::ParametersType

Definition at line 120 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef SmartPointer< Self > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::Pointer

Definition at line 80 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef NeighborhoodIteratorType::RadiusType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::RadiusType

Definition at line 162 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::RealType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::RealType

Definition at line 107 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef RigidityImageType::IndexType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::RigidityImageIndexType

Definition at line 169 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef ImageRegionIterator< RigidityImageType > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::RigidityImageIteratorType

Definition at line 171 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef RigidityImageType::Pointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::RigidityImagePointer

Definition at line 166 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef RigidityImageType::PointType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::RigidityImagePointType

Definition at line 170 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef RigidityImageType::RegionType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::RigidityImageRegionType

Definition at line 168 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef CoefficientImageType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::RigidityImageType

Typedef's for the construction of the rigidity image.

Definition at line 165 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef RigidityImageType::PixelType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::RigidityPixelType

Definition at line 167 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::ScalarType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::ScalarType

Definition at line 124 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef TransformRigidityPenaltyTerm itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::Self

Standard itk stuff.

Definition at line 77 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef StructuringElementType::RadiusType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SERadiusType

Definition at line 175 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::SpatialHessianType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SpatialHessianType

Definition at line 130 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::SpatialJacobianType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SpatialJacobianType

Typedefs from the AdvancedTransform.

Definition at line 127 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef BinaryBallStructuringElement< RigidityPixelType, itkGetStaticConstMacro( FixedImageDimension ) > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::StructuringElementType

Definition at line 174 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef TransformPenaltyTerm< TFixedImage, TScalarType > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::Superclass

Definition at line 79 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::TransformJacobianType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::TransformJacobianType

Definition at line 104 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::TransformParametersType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::TransformParametersType

Definition at line 103 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::TransformPointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::TransformPointer

Definition at line 100 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
typedef Superclass::TransformType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::TransformType

Definition at line 99 of file itkTransformRigidityPenaltyTerm.h.

Constructor & Destructor Documentation

template<class TFixedImage, class TScalarType>
itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::TransformRigidityPenaltyTerm ( )
protected

The constructor.

template<class TFixedImage, class TScalarType>
virtual itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::~TransformRigidityPenaltyTerm ( )
inlineprotectedvirtual

The destructor.

Definition at line 298 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::TransformRigidityPenaltyTerm ( const Self )
private

The private constructor.

Member Function Documentation

template<class TFixedImage, class TScalarType>
virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::BeforeThreadedGetValueAndDerivative ( const TransformParametersType parameters) const
virtual

Contains calls from GetValueAndDerivative that are thread-unsafe.

Reimplemented from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >.

template<class TFixedImage, class TScalarType>
void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::CheckUseAndCalculationBooleans ( void  )

Check stuff.

template<class TFixedImage, class TScalarType>
void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::Create1DOperator ( NeighborhoodType F,
const std::string &  whichF,
const unsigned int  WhichDimension,
const CoefficientImageSpacingType spacing 
) const
private

Private function used for the filtering. It creates 1D separable operators F.

template<class TFixedImage, class TScalarType>
void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::CreateNDOperator ( NeighborhoodType F,
const std::string &  whichF,
const CoefficientImageSpacingType spacing 
) const
private

Private function used for the filtering. It creates ND inseparable operators F.

template<class TFixedImage, class TScalarType>
virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::DilateRigidityImages ( void  )
privatevirtual

Internal function to dilate the rigidity images.

template<class TFixedImage, class TScalarType>
void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::FillRigidityCoefficientImage ( const ParametersType parameters) const

Function to fill the RigidityCoefficientImage every iteration.

template<class TFixedImage, class TScalarType>
CoefficientImagePointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::FilterSeparable ( const CoefficientImageType ,
const std::vector< NeighborhoodType > &  Operators 
) const
private

Private function used for the filtering. It performs 1D separable filtering.

template<class TFixedImage, class TScalarType>
virtual const char* itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetClassName ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from itk::TransformPenaltyTerm< TFixedImage, TScalarType >.

Reimplemented in elastix::TransformRigidityPenalty< TElastix >.

template<class TFixedImage, class TScalarType>
virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetDerivative ( const ParametersType parameters,
DerivativeType derivative 
) const
virtual

The GetDerivative()-method returns the rigid penalty derivative.

template<class TFixedImage, class TScalarType>
virtual const MeasureType& itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetLinearityConditionGradientMagnitude ( )
virtual

Get the gradient magnitude of the linearity condition.

template<class TFixedImage, class TScalarType>
virtual const MeasureType& itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetLinearityConditionValue ( )
virtual

Get the value of the linearity condition.

template<class TFixedImage, class TScalarType>
virtual ScalarType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetLinearityConditionWeight ( )
virtual
template<class TFixedImage, class TScalarType>
virtual const MeasureType& itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetOrthonormalityConditionGradientMagnitude ( )
virtual

Get the gradient magnitude of the orthonormality condition.

template<class TFixedImage, class TScalarType>
virtual const MeasureType& itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetOrthonormalityConditionValue ( )
virtual

Get the value of the orthonormality condition.

template<class TFixedImage, class TScalarType>
virtual ScalarType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetOrthonormalityConditionWeight ( )
virtual
template<class TFixedImage, class TScalarType>
virtual const MeasureType& itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetPropernessConditionGradientMagnitude ( )
virtual

Get the gradient magnitude of the properness condition.

template<class TFixedImage, class TScalarType>
virtual const MeasureType& itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetPropernessConditionValue ( )
virtual

Get the value of the properness condition.

template<class TFixedImage, class TScalarType>
virtual ScalarType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetPropernessConditionWeight ( )
virtual
template<class TFixedImage, class TScalarType>
virtual MeasureType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetValue ( const ParametersType parameters) const
virtual

The GetValue()-method returns the rigid penalty value.

template<class TFixedImage, class TScalarType>
virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::GetValueAndDerivative ( const ParametersType parameters,
MeasureType value,
DerivativeType derivative 
) const
virtual

The GetValueAndDerivative()-method returns the rigid penalty value and its derivative.

template<class TFixedImage, class TScalarType>
virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::Initialize ( void  )
throw (ExceptionObject
)
virtual

Initialize the penalty term.

Reimplemented from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >.

Reimplemented in elastix::TransformRigidityPenalty< TElastix >.

template<class TFixedImage, class TScalarType>
itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::itkStaticConstMacro ( FixedImageDimension  ,
unsigned  int,
FixedImageType::ImageDimension   
)

Define the dimension.

template<class TFixedImage, class TScalarType>
itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::itkStaticConstMacro ( MovingImageDimension  ,
unsigned  int,
FixedImageType::ImageDimension   
)
template<class TFixedImage, class TScalarType>
itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::itkStaticConstMacro ( ImageDimension  ,
unsigned  int,
FixedImageType::ImageDimension   
)
template<class TFixedImage, class TScalarType>
static Pointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::New ( )
static

Method for creation through the object factory.

template<class TFixedImage, class TScalarType>
void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::operator= ( const Self )
private

The private copy constructor.

template<class TFixedImage, class TScalarType>
void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
protected

PrintSelf.

template<class TFixedImage, class TScalarType>
virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetBSplineTransform ( BSplineTransformType _arg)
virtual

Set the B-spline transform in this class. This class expects a BSplineTransform! It is not suited for others.

template<class TFixedImage, class TScalarType>
virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetCalculateLinearityCondition ( bool  _arg)
virtual

Set the calculation of the linearity condition part, even if we don't use it.

template<class TFixedImage, class TScalarType>
virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetCalculateOrthonormalityCondition ( bool  _arg)
virtual

Set the calculation of the orthonormality condition part, even if we don't use it.

template<class TFixedImage, class TScalarType>
virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetCalculatePropernessCondition ( bool  _arg)
virtual

Set the calculation of the properness condition part., even if we don't use it.

template<class TFixedImage, class TScalarType>
virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetDilateRigidityImages ( bool  _arg)
virtual

Get the value of the total rigidity penalty term. Set if the RigidityImage's are dilated.

template<class TFixedImage, class TScalarType>
virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetDilationRadiusMultiplier ( CoordinateRepresentationType  _arg)
virtual

Set the DilationRadiusMultiplier.

template<class TFixedImage, class TScalarType>
virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetFixedRigidityImage ( RigidityImageType _arg)
virtual

Set the fixed coefficient image.

template<class TFixedImage, class TScalarType>
virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetLinearityConditionWeight ( ScalarType  _arg)
virtual

Set the RigidityImage in this class. Set/Get the weight of the linearity condition part.

template<class TFixedImage, class TScalarType>
virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetMovingRigidityImage ( RigidityImageType _arg)
virtual

Set the moving coefficient image.

template<class TFixedImage, class TScalarType>
virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetOrthonormalityConditionWeight ( ScalarType  _arg)
virtual

Set/Get the weight of the orthonormality condition part.

template<class TFixedImage, class TScalarType>
virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetPropernessConditionWeight ( ScalarType  _arg)
virtual

Set/Get the weight of the properness condition part.

template<class TFixedImage, class TScalarType>
virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetUseFixedRigidityImage ( bool  _arg)
virtual

Set to use the FixedRigidityImage or not.

template<class TFixedImage, class TScalarType>
virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetUseLinearityCondition ( bool  _arg)
virtual

Set the usage of the linearity condition part.

template<class TFixedImage, class TScalarType>
virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetUseMovingRigidityImage ( bool  _arg)
virtual

Set to use the MovingRigidityImage or not.

template<class TFixedImage, class TScalarType>
virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetUseOrthonormalityCondition ( bool  _arg)
virtual

Set the usage of the orthonormality condition part.

template<class TFixedImage, class TScalarType>
virtual void itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::SetUsePropernessCondition ( bool  _arg)
virtual

Set the usage of the properness condition part.

Field Documentation

template<class TFixedImage, class TScalarType>
BSplineTransformPointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_BSplineTransform
private

Member variables.

Definition at line 326 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
bool itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_CalculateLinearityCondition
private

Definition at line 342 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
bool itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_CalculateOrthonormalityCondition
private

Definition at line 343 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
bool itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_CalculatePropernessCondition
private

Definition at line 344 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
bool itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_DilateRigidityImages
private

Definition at line 348 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
CoordinateRepresentationType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_DilationRadiusMultiplier
private

Rigidity image variables.

Definition at line 347 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
RigidityImagePointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_FixedRigidityImage
private

Definition at line 350 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
RigidityImagePointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_FixedRigidityImageDilated
private

Definition at line 355 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
std::vector< DilateFilterPointer > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_FixedRigidityImageDilation
private

Definition at line 353 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
MeasureType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_LinearityConditionGradientMagnitude
mutableprivate

Definition at line 335 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
MeasureType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_LinearityConditionValue
mutableprivate

Definition at line 332 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
ScalarType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_LinearityConditionWeight
private

Definition at line 327 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
RigidityImagePointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_MovingRigidityImage
private

Definition at line 351 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
RigidityImagePointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_MovingRigidityImageDilated
private

Definition at line 356 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
std::vector< DilateFilterPointer > itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_MovingRigidityImageDilation
private

Definition at line 354 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
MeasureType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_OrthonormalityConditionGradientMagnitude
mutableprivate

Definition at line 336 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
MeasureType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_OrthonormalityConditionValue
mutableprivate

Definition at line 333 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
ScalarType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_OrthonormalityConditionWeight
private

Definition at line 328 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
MeasureType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_PropernessConditionGradientMagnitude
mutableprivate

Definition at line 337 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
MeasureType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_PropernessConditionValue
mutableprivate

Definition at line 334 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
ScalarType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_PropernessConditionWeight
private

Definition at line 329 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
RigidityImagePointer itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_RigidityCoefficientImage
private

Definition at line 352 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
bool itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_RigidityCoefficientImageIsFilled
mutableprivate

Definition at line 349 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
MeasureType itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_RigidityPenaltyTermValue
mutableprivate

Definition at line 331 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
bool itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_UseFixedRigidityImage
private

Definition at line 357 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
bool itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_UseLinearityCondition
private

Definition at line 339 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
bool itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_UseMovingRigidityImage
private

Definition at line 358 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
bool itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_UseOrthonormalityCondition
private

Definition at line 340 of file itkTransformRigidityPenaltyTerm.h.

template<class TFixedImage, class TScalarType>
bool itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >::m_UsePropernessCondition
private

Definition at line 341 of file itkTransformRigidityPenaltyTerm.h.



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